Sprout Selection (Thinning): When, Why and How to Select Your Sprouts

Edited

Sprout selection (also called thinning) is choosing which sprouts to keep while removing the extras. It’s one of the most important early steps for success because it prevents overcrowding and resource competition, giving the remaining plant(s) enough light, nutrients, water, airflow and space to thrive.

We intentionally overseed our yCubes to ensure reliable germination, so seeing multiple sprouts is normal. But more sprouts in one yCube does not mean more to harvest later. It may feel counterintuitive, but selecting a few healthy sprouts and removing extras early in the process reduces competition and helps the plant(s) you keep develop strong roots, optimize growth, and ensure the best quality harvest.

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At a Glance

  • The number of sprouts you select to keep growing in each yCube is based on plant type

    • Keep 1 sprout for leafy greens, lettuces, fruiting plants and large flowers

    • Keep 3 sprouts for herbs and small flowers

    • Do not sprout select: Arugula, Chamomile, Chives, Garlic Chives and Wheatgrass

  • Timing: Select your sprouts about 1 week after they’ve been exposed to plant food (about 3 weeks after planting)

  • Use clean scissors and cut stems at the base (do not pull)

  • Each stem=one sprout, even if it has multiple leaves

  • Tip: Many lettuce, leafy green and herb sprouts are edible

Why Sprout selection matters

Sprout selection prevents competition for limited resources. When multiple sprouts share one yCube, they compete for the same light, water, nutrients, airflow and space, so no single plant reaches its full potential.

When too many sprouts grow in one yCube, you’re more likely to see:

  • Leggy, weak stems as sprouts stretch for light

  • Reduced airflow, increasing the risk of mold and pests

  • Uneven growth and slower establishment

  • Lower harvest quality later on

How many sprouts should I keep?

Keep 1 sprout per yCube

  • Lettuce and leafy greens

  • Fruiting plants

  • Large flowers

Tip: Leafy green, lettuce, and herb sprouts are all edible, so try ‘em out!

Leafy green yCube, sprouts unselected (left) and sprout selected with 1 sprout remaining (right)

Fruiting plant yCube, sprout unselected (left) and sprouts selected with 1 sprout remaining (right)

Keep 3 sprouts per yCube

  • Herbs

  • Small flowers

Basil yCube, sprouts unselected (left) and sprouts selected with 3 sprouts remaining (right)

Do not sprout select (keep all sprouts)

  • Arugula

  • Chamomile

  • Chives

  • Garlic

  • Wheatgrass

Timing: When to sprout select

Sprout selection is best completed about one week after your sprouts have received plant food. This timing makes it easier to see which sprouts are truly thriving and gives the remaining sprouts room to develop.

Kelby will send a task in the app when it’s time to do sprout selection and will include step-by-step guidance. All you need is a clean pair of scissors (like Gardyn Scissors) to cut the extra sprouts at the base.

What counts as one sprout?

A sprout is one stem emerging from the rockwool. A single sprout may have multiple leaves. If there are multiple stems, there are multiple sprouts.

How to select your sprouts

  1. Use clean scissors (like Gardyn scissors).

  2. Choose the sprout(s) you want to keep

    Tip: Taller isn’t always better. Choose sprouts that look sturdy and balanced, not thin and stretched.

  3. Cut unwanted sprouts at the base, as close to the rockwool as possible.

  4. Do not pull sprouts out. Pulling sprouts out can damage the roots of the sprout(s) you’re keeping.

Optional: Add a yCover after sprout selection

Once you’ve thinned your sprouts, consider placing a yCover on the yCube. Blocking light from reaching the rockwool is one of the most effective ways to reduce algae as your plant develops.

If you’re not sure what category your plant is in, use the list below to find it by name.

Plant list: How many sprouts to keep (by plant type and variety)

Keep 1 sprout

Fruiting plants: Banana Pepper, Burrito Pepper, Candy Cane Pepper, Cape Gooseberry, Cucumber, Dragon Beans, Fairytale Eggplant, Goliath Pepper, Green Beans, Hungarian Hot Wax Pepper, Jalapeño, Lemon Hot Pepper, Mini Eggplant, Mini Pumpkin, Mini Okra, Mini Squash, Peas, Poblano Pepper, Purple Beans, Purple Cayenne Pepper, Red Cherry Tomato, Shishito Pepper, Sweet Peppers, Thai Eggplant, Yellow Beans, Yellow Cherry Tomato

Lettuces & Leafy Greens: American Mustard, Breen, Bronze Arrow, Bull's Blood Beets, Buttercrunch, Butterhead, Cardinale, Celery, Collard Greens, Endive Lettuce, Flashy Trout Back, Green Bok Choy, Green Cabbage, Green Mustard, Green Salanova, Green Tatsoi, Hon Tsai Tai, Iceberg, Kale, Kale Lacinato, Kohlrabi (Purple and White), Lollo Rossa, Matilda, Mini Broccoli, Mini Cauliflower, Monte Carlo, Muir Lettuce, Perpetual Spinach, Pink Celery, Pink Swiss Chard, Purple Bok Choy, Radicchio, Red Amaranth, Red Mustard, Red Romaine, Red Sails Lettuce, Red Salad Bowl, Red Sorrel, Red Tatsoi, Romaine, Rouge d'Hiver, Shiso, Swiss Chard, Tokyo Bekana, Wasabi Greens, Yellow Swiss Chard

Large flowers: Bi-Color Sunflower, Blue Cornflower, Blush Hibiscus, Borage, Canna Flower, Sunflower, Red Hibiscus

Keep 3 sprouts

Herbs: Basil, Bunching Onions, Catnip, Chervil, Cilantro, Dill, Holy Basil, Italian Parsley, Lavender, Lemon Balm, Lemongrass, Lime Basil, Mint, Oregano, Purple Basil, Purslane, Rosemary, Sage, Savory, Stevia, Sweet Thai Basil, Sweet Marjoram, Tarragon, Thyme, Watercress

Small flowers: Black Viola, Celosia Mix, Dianthus, Fiesta Gitana, Fuchsia Snapdragon, Marigold, Nasturtium, Night-Scented Stock, Oopsy Daisy, Pink Petunia, Portulaca Mix, Purple Campanula, Purple Snapdragon, Radio Calendula, Red Impatiens, Scarlet Snapdragon, Stock Flower, Torenia, Viola, White Petunia, Yellow Snapdragon, Zinnia

Fruiting plants: Mini Strawberries (Red and Yellow)

Do not sprout select

Arugula; Chamomile; Chives; Garlic Chives; Wheatgrass

Questions? Reach us at support@mygardyn.com, or chat with us! We're here to help.

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